cg_openmm
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User Guide
Installation
Examples
API documentation:
Build module
CGModel class
Ensembles module
Parameters module
Simulation module
Thermo module
Utilities module
cg_openmm
Index
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Index
B
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C
|
G
|
M
|
P
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S
B
bin_samples() (in module cg_openmm.parameters.reweight)
bootstrap_heat_capacity() (in module cg_openmm.thermo.calc)
bootstrap_partial_heat_capacities() (in module cg_openmm.thermo.calc)
C
cg_openmm.parameters.reweight
module
,
[1]
cg_openmm.simulation.physical_validation
module
,
[1]
cg_openmm.thermo.calc
module
,
[1]
G
get_cv_FWHM() (in module cg_openmm.thermo.calc)
get_decorrelated_samples() (in module cg_openmm.parameters.reweight)
get_enthalpy_differences() (in module cg_openmm.parameters.reweight)
get_entropy_differences() (in module cg_openmm.parameters.reweight)
get_free_energy_differences() (in module cg_openmm.parameters.reweight)
get_heat_capacity() (in module cg_openmm.thermo.calc)
get_heat_capacity_derivative() (in module cg_openmm.thermo.calc)
get_heat_capacity_reeval() (in module cg_openmm.thermo.calc)
get_intermediate_temperatures() (in module cg_openmm.parameters.reweight)
get_mbar_expectation() (in module cg_openmm.parameters.reweight)
get_opt_temperature_list() (in module cg_openmm.parameters.reweight)
get_partial_heat_capacities() (in module cg_openmm.thermo.calc)
get_temperature_list() (in module cg_openmm.parameters.reweight)
M
module
cg_openmm.parameters.reweight
,
[1]
cg_openmm.simulation.physical_validation
,
[1]
cg_openmm.thermo.calc
,
[1]
P
physical_validation_ensemble() (in module cg_openmm.simulation.physical_validation)
plot_heat_capacity() (in module cg_openmm.thermo.calc)
plot_partial_heat_capacities() (in module cg_openmm.thermo.calc)
S
set_simulation_data() (in module cg_openmm.simulation.physical_validation)